Description

heart and neural crest derivatives expressed transcript 1 [Source:MGI Symbol;Acc:MGI:103577]

Location
INSDC coordinates

chromosome:GRCm38:CM001004.2:57828705:57832818:1

About this gene

This gene has 3 transcripts (splice variants), 52 orthologues, 10 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Hand1-001ENSMUST000000369171904216aaENSMUSP00000046999
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24721Q5SQG1 Q64279 NM_008213
NP_032239
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Hand1-201ENSMUST000001603921806216aaENSMUSP00000124951
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24721Q5SQG1 Q64279 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Hand1-002ENSMUST0000010884535431aaENSMUSP00000104473
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5SQG0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays