Description

retinoblastoma binding protein 7 [Source:MGI Symbol;Acc:MGI:1194910]

INSDC coordinates

chromosome:GRCm38:CM001013.2:162760402:162779092:1

About this gene

This gene has 5 transcripts (splice variants), 65 orthologues, 2 paralogues, is a member of 2 Ensembl protein families and is associated with 2 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Rbbp7-001ENSMUST000000337202244425aaENSMUSP00000033720
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30509Q60973 NM_009031
NP_033057
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Rbbp7-003ENSMUST000001123271862416aaENSMUSP00000107946
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AFJ1 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rbbp7-002ENSMUST000001123261430386aaENSMUSP00000107945
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AFI9 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rbbp7-004ENSMUST0000014368178476aaENSMUSP00000115354
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6U539 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Rbbp7-005ENSMUST00000138791705236aaENSMUSP00000114734
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6ZLC6 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays