Description

polyglutamine binding protein 1 [Source:MGI Symbol;Acc:MGI:1859638]

Location
INSDC coordinates

chromosome:GRCm38:CM001013.2:7894519:7899269:1

Transcripts

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Pqbp1-002ENSMUST000001156541374263 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29977A2AER7 A2AER8 A2AER9
Q91VJ5
NM_001252528
NP_001239457
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Pqbp1-004ENSMUST000001156551148263 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29977A2AER7 A2AER8 A2AER9
Q91VJ5
NM_019478
NP_062351
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Pqbp1-001ENSMUST000000334971104263 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29977A2AER7 A2AER8 A2AER9
Q91VJ5
NM_001252529
NP_001239458
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Pqbp1-003ENSMUST00000156741763236 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AER8 A2AER9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Pqbp1-005ENSMUST00000154552436100 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AER9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays