Description

protein tyrosine phosphatase, receptor type, O [Source:MGI Symbol;Acc:MGI:1097152]

INSDC coordinates

chromosome:GRCm38:CM000999.2:137252299:137464629:1

About this gene

This gene has 3 transcripts (splice variants), 61 orthologues, 12 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ptpro-201ENSMUST0000007711566171226aaENSMUSP00000076364
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS20664E9Q612 NM_011216
NP_035346
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P3

PRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ptpro-203ENSMUST0000016767965331198aaENSMUSP00000127112
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51943E9Q4I1 NM_001164401
NP_001157873
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ptpro-202ENSMUST000001670024163405aaENSMUSP00000131764
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51944E9PVJ6 NM_001164402
NM_001164403
NP_001157874
NP_001157875
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays