Description

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A [Source:MGI Symbol;Acc:MGI:107560]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:88435959:88461182:1

Transcripts

This gene has 19 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Sema4a-001ENSMUST000000297003205 bp760 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17475D3YUM4 D3YVM6 D3YZ30
D3Z336 Q62178
NM_013658
NP_038686
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sema4a-201ENSMUST000001658983125 bp760 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17475D3YUM4 D3YVM6 D3YZ30
D3Z336 Q62178
NM_001163490
NP_001156962
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sema4a-203ENSMUST000001692223084 bp760 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17475D3YUM4 D3YVM6 D3YZ30
D3Z336 Q62178
NM_001163491
NP_001156963
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sema4a-202ENSMUST000001662373046 bp760 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17475D3YUM4 D3YVM6 D3YZ30
D3Z336 Q62178
NM_001163489
NP_001156961
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sema4a-002ENSMUST000001075312897 bp628 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YWV5 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sema4a-004ENSMUST00000127436845 bp234 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YUM4 D3YVM6 D3YZ30
D3Z336
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sema4a-005ENSMUST00000147200706 bp203 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YUM4 D3YVM6 D3Z336
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sema4a-003ENSMUST00000141471630 bp61 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVM6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sema4a-011ENSMUST00000125526506 bp113 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVM6 D3Z336 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sema4a-010ENSMUST00000123753385 bp17 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sema4a-008ENSMUST00000184487866 bp170 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3YVM6 D3Z336 V9GXF5
-
Sema4a-009ENSMUST00000184876748 bp180 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3YVM6 D3Z336 V9GXH9
-
Sema4a-007ENSMUST00000185137699 bp47 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-V9GWW2 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Sema4a-012ENSMUST00000146921371 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Sema4a-015ENSMUST000001355392487 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Sema4a-014ENSMUST000001491452357 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Sema4a-016ENSMUST000001561082108 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--NR_105978
Sema4a-006ENSMUST00000135732713 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Sema4a-013ENSMUST00000184972465 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays