Gene: Gpsm2 ENSMUSG00000027883

Description

G-protein signalling modulator 2 (AGS3-like, C. elegans) [Source:MGI Symbol;Acc:MGI:1923373]

Gene Synonyms

6230410J09Rik, LGN, Pins

Location

Chromosome 3: 108,585,954-108,629,625 reverse strand.

GRCm39:CM000996.3

About this gene

This gene has 4 transcripts (splice variants), 112 orthologues, 5 paralogues and is associated with 26 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000029482.16	Gpsm2-201	3498	679aa	ENSMUSP00000029482.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51048	Q3UPG3 Q8VDU0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000145558.2	Gpsm2-203	800	154aa	ENSMUSP00000115759.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2AEL5	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000124043.2	Gpsm2-202	187	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000154263.2	Gpsm2-204	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Gene: Gpsm2 ENSMUSG00000027883

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Gpsm2 ENSMUSG00000027883

Summary

About Us

Get help

Our sister sites

Follow us