Description

discoidin domain receptor family, member 2 [Source:MGI Symbol;Acc:MGI:1345277]

INSDC coordinates

chromosome:GRCm38:CM000994.2:169972307:170110762:1

About this gene

This gene has 6 transcripts (splice variants), 75 orthologues, 13 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ddr2-001ENSMUST000001946908590854aaENSMUSP00000141443
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48436Q62371 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ddr2-202ENSMUST000001708008289854aaENSMUSP00000129624
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48436Q62371 NM_022563
NP_072075
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ddr2-201ENSMUST000000279852928854aaENSMUSP00000027985
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48436Q62371 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ddr2-002ENSMUST00000192312672129aaENSMUSP00000142191
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YXY2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Ddr2-004ENSMUST00000194619442No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Ddr2-003ENSMUST00000195867641No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays