Description

cyclic nucleotide gated channel alpha 3 [Source:MGI Symbol;Acc:MGI:1341818]

Location
INSDC coordinates

chromosome:GRCm38:CM000994.2:37214434:37263384:1

About this gene

This gene has 4 transcripts (splice variants), 73 orthologues, 17 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Cnga3-001ENSMUST000000272883554631aaENSMUSP00000027288
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14890Q9JJZ8 NM_009918
NP_034048
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Cnga3-004ENSMUST000001941952083631aaENSMUSP00000142075
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14890Q9JJZ8 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Cnga3-003ENSMUST000001952722197669aaENSMUSP00000142175
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YXW9 NM_001282010
NP_001268939
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Cnga3-002ENSMUST0000019198165171aaENSMUSP00000142235
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YY14 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.

Gene-based displays