Description

retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]

Location
INSDC coordinates

chromosome:GRCm38:CM000994.2:4290846:4409241:1

About this gene

This gene has 2 transcripts (splice variants), 56 orthologues, 1 paralogue and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Rp1-001ENSMUST0000002703268692095aaENSMUSP00000027032
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14804P56716 NM_011283
NP_035413
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Rp1-002ENSMUST000001949923047285aaENSMUSP00000142146
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YXU6 NM_001195662
NP_001182591
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays