Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Nudt16l1 ENSMUSG00000022516

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Description

nudix hydrolase 16 like 1 [Source:MGI Symbol;Acc:MGI:1914161]

Gene Synonyms

1110001K21Rik, 5330437I08Rik, nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1, syndesmos

Location

Chromosome 16: 4,756,625-4,758,896 forward strand.

GRCm39:CM001009.3

About this gene

This gene has 5 transcripts (splice variants), 171 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000230931.2	Nudt16l1-205	1618	211aa	ENSMUSP00000155142.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27927	Q8VHN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000050881.10	Nudt16l1-201	1329	151aa	ENSMUSP00000054201.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8VHN8-3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000229961.2	Nudt16l1-202	1162	199aa	ENSMUSP00000154873.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VH99	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000230201.2	Nudt16l1-203	1004	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000230224.2	Nudt16l1-204	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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