Description

vaccinia related kinase 1 [Source:MGI Symbol;Acc:MGI:1261847]

INSDC coordinates

chromosome:GRCm38:CM001005.2:106010263:106077410:1

About this gene

This gene has 3 transcripts (splice variants), 69 orthologues, 10 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Vrk1-201ENSMUST000000215393796440aaENSMUSP00000021539
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36551Q80X41 NM_011705
NP_035835
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Vrk1-203ENSMUST000000850263724416aaENSMUSP00000082101
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26157Q3UWH3 Q80X41 NM_001029843
NP_001025014
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Vrk1-202ENSMUST000000720403664396aaENSMUSP00000071922
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26158Q80X41 NM_001029844
NP_001025015
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays