Description

RNA binding motif protein 4 [Source:MGI Symbol;Acc:MGI:1100865]

Location
INSDC coordinates

chromosome:GRCm38:CM001012.2:4784293:4793901:1

Transcripts



This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Rbm4-001ENSMUST000001802482610361 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29436B7ZN14 F6TBN8 J3QPA9
Q8C7Q4
NM_001290122
NM_001290123
NM_001290127
NM_009032
NP_001277051
NP_001277052
NP_001277056
NP_033058
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Rbm4-002ENSMUST000001786151018143 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5CZX8 NP_001277053
NP_001277054
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rbm4-006ENSMUST00000164209801143 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5CZX8 NP_001277053
NP_001277054
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rbm4-004ENSMUST00000179189738227 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6TBN8 J3QPA9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Rbm4-005ENSMUST00000164376583172 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6TBN8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Rbm4-003ENSMUST000001798202965No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays