Description

RNA binding motif protein 4 [Source:MGI Symbol;Acc:MGI:1100865]

Location
INSDC coordinates

chromosome:GRCm38:CM001012.2:4784293:4793901:1

About this gene

This gene has 6 transcripts (splice variants), 93 orthologues, 3 paralogues, is a member of 1 Ensembl protein family and is associated with 2 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Rbm4-001ENSMUST000001802482610361aaENSMUSP00000137345
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29436B7ZN14 Q8C7Q4 NM_001290122
NM_001290123
NM_009032
NP_001277051
NP_001277052
NP_033058
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Rbm4-002ENSMUST000001786151018143aaENSMUSP00000136254
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5CZX8 NP_001277053
NP_001277054
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rbm4-006ENSMUST00000164209801143aaENSMUSP00000129745
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5CZX8 NP_001277053
NP_001277054
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rbm4-004ENSMUST00000179189738227aaENSMUSP00000137174
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QPA9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Rbm4-005ENSMUST00000164376583172aaENSMUSP00000127564
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6TBN8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Rbm4-003ENSMUST000001798202965No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays