Description

G patch domain and ankyrin repeats 1 [Source:MGI Symbol;Acc:MGI:2148975]

Location
INSDC coordinates

chromosome:GRCm38:CM001010.2:35121455:35124814:1

Transcripts



This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Gpank1-002ENSMUST000001653061518349 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50084G3UZZ1 H3BL77 Q6PES3
Q8HWA0
NM_001128597
NP_001122069
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Gpank1-001ENSMUST000000521671295372 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28685G3UZZ1 H3BL77 Q61858
Q6PES3 Q8HWA0
NM_032460
NP_115849
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Gpank1-004ENSMUST00000173043676202 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3UZZ1 H3BL77 Q8HWA0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gpank1-003ENSMUST0000017338057782 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3UZZ1 Q8HWA0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gpank1-005ENSMUST00000177018253No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays