Description

zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]

Location
INSDC coordinates

chromosome:GRCm38:CM001013.2:58022700:58041736:1

About this gene

This gene has 4 transcripts (splice variants), 52 orthologues, 14 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Zic3-001ENSMUST000000886273949466aaENSMUSP00000085999
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30155Q62521 NM_009575
NP_033601
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Zic3-002ENSMUST000000886312980246aaENSMUSP00000086003
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AWK6 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Zic3-003ENSMUST000000886291951456aaENSMUSP00000086001
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q62521 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Zic3-004ENSMUST0000013768756689aaENSMUSP00000116383
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AWK4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays