Description

sphingosine kinase 1 [Source:MGI Symbol;Acc:MGI:1316649]

INSDC coordinates

chromosome:GRCm38:CM001004.2:116530925:116536674:1

Transcripts

This gene has 16 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Sphk1-006ENSMUST000000633962659 bp382 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25668B1AT85 B1AT86 Q8CI15
NM_025367
NP_079643
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sphk1-005ENSMUST000000634462527 bp382 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25668B1AT85 B1AT86 Q8CI15
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sphk1-002ENSMUST000001063871957 bp382 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25668B1AT85 B1AT86 Q8CI15
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sphk1-003ENSMUST000001063881891 bp382 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25668B1AT85 B1AT86 Q8CI15
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sphk1-004ENSMUST000001063861879 bp382 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25668B1AT85 B1AT86 Q8CI15
NM_001172472
NM_001172473
NP_001165943
NP_001165944
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sphk1-001ENSMUST000001002011800 bp381 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48986B1AT87 B1AT88 B1AT89
Q8CI15
NM_001172475
NP_001165946
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sphk1-007ENSMUST000001417981532 bp388 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25669Q8CI15 NM_011451
NP_035581
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sphk1-012ENSMUST000001540341050 bp251 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AT87 B1AT88 B1AT89
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sphk1-010ENSMUST00000145737904 bp157 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AT87 B1AT88 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sphk1-014ENSMUST00000124682863 bp154 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AT85 B1AT86 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sphk1-008ENSMUST00000138840735 bp153 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AT87 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sphk1-011ENSMUST00000155102663 bp116 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AT85 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sphk1-013ENSMUST00000150658740 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Sphk1-016ENSMUST000001348344063 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Sphk1-009ENSMUST00000136526600 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Sphk1-015ENSMUST00000148185522 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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