Description

transformation related protein 53 [Source:MGI Symbol;Acc:MGI:98834]

Location
INSDC coordinates

chromosome:GRCm38:CM001004.2:69580359:69591873:1

Transcripts

This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Trp53-202ENSMUST000001712471867381 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48826A5JTV6 A6YM30 I7HIK9
Q3UGQ1 Q6TDG9 Q80ZA1
Q8C526 Q9JLE0
NM_001127233
NP_001120705
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Trp53-201ENSMUST000001086581771390 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36193A5JTV6 A6YM30 Q3UGQ1
Q549C9 Q6TDG9 Q8C526
Q9JLE1
NM_011640
NP_035770
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website
Trp53-002ENSMUST000001086571822378 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A5JTV6 A6YM30 I7HIK9
Q6TDG9 Q9JLE0
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Trp53-001ENSMUST000000053711772387 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A5JTV6 A6YM30 P02340
Q6TDG9 Q9JLE1
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
Trp53-003ENSMUST000001475123275No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Trp53-004ENSMUST00000130540403No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays