Description

ribosomal protein L38 [Source:MGI Symbol;Acc:MGI:1914921]

INSDC coordinates

chromosome:GRCm38:CM001004.2:114668524:114672331:1

About this gene

This gene has 4 transcripts (splice variants), 70 orthologues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Rpl38-003ENSMUST0000010659945770aaENSMUSP00000102209
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36365Q52KP0 Q9JJI8 NM_001048058
NP_001041523
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Rpl38-001ENSMUST0000010660237170aaENSMUSP00000102213
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36365Q52KP0 Q9JJI8 NM_023372
NP_075861
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Rpl38-002ENSMUST0000007791536470aaENSMUSP00000102211
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36365Q52KP0 Q9JJI8 NM_001048057
NP_001041522
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Rpl38-004ENSMUST0000008209234570aaENSMUSP00000080741
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36365Q52KP0 Q9JJI8 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website

Gene-based displays