Description

KxDL motif containing 1 [Source:MGI Symbol;Acc:MGI:1922870]

Location
INSDC coordinates

chromosome:GRCm38:CM001001.2:70508272:70527956:1

About this gene

This gene has 9 transcripts (splice variants), 55 orthologues and is a member of 3 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Kxd1-001ENSMUST000000934561216177aaENSMUSP00000091165
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52574D3Z2M8 Q80XH1 NM_029366
NP_083642
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Kxd1-006ENSMUST00000118850992219aaENSMUSP00000113816
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z2M8 G3X9Z9 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Kxd1-007ENSMUST00000138260917193aaENSMUSP00000123438
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A5JUZ1 B0LAC2 D3Z2M8
E9Q4P0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Kxd1-005ENSMUST00000121623884232aaENSMUSP00000113804
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A5JUZ1 B0LAC2 D3Z2M8
E9Q4P0 E9Q9J0 E9QNP0
Q66JP1
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Kxd1-003ENSMUST00000117580696114aaENSMUSP00000112561
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YWA5 D3Z2M8 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Kxd1-004ENSMUST0000013286743637aaENSMUSP00000123679
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YXX6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Kxd1-009ENSMUST00000137610424100aaENSMUSP00000121539
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z2M8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Kxd1-008ENSMUST00000155677639114aaENSMUSP00000123548
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3YWA5 D3Z2M8 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Kxd1-002ENSMUST000001385861033No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays