Description

GTPase, IMAP family member 4 [Source:MGI Symbol;Acc:MGI:1349656]

Location
INSDC coordinates

chromosome:GRCm38:CM000999.2:48684549:48692060:1

Transcripts



This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Gimap4-006ENSMUST000000900701804328 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS20110D3YTN4 NM_174990
NP_778155
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI2APPRIS candidate principal isoform (longest CCDS) [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Gimap4-001ENSMUST000000675061359219 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57423Q99JY3 NM_001243199
NP_001230128
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Gimap4-003ENSMUST0000011957590058 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57422D3Z3F3 NM_001243201
NP_001230130
TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Gimap4-005ENSMUST0000012195777589 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39481D3Z7N6 D3Z7Q4 NM_175048
NP_778213
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Gimap4-004ENSMUST00000118802771200 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57421D3YWB5 NM_001243200
NP_001230129
TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Gimap4-002ENSMUST00000156770107669 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RGS2 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays