Description

taxilin alpha [Source:MGI Symbol;Acc:MGI:105968]

INSDC coordinates

chromosome:GRCm38:CM000997.2:129626078:129641065:1

Transcripts

This gene has 7 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Txlna-001ENSMUST000000842644847554 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS38887A2ADZ2 A2ADZ3 A2ADZ4
A8Y5J8 Q3UD58 Q6PAM1
NM_001005506
NP_001005506
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Txlna-201ENSMUST000000464254569554 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS38887A2ADZ2 A2ADZ3 A2ADZ4
A8Y5J8 Q3UD58 Q6PAM1
NM_001199695
NP_001186624
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Txlna-003ENSMUST00000133803989296 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ADZ2 A2ADZ3 A2ADZ4
A8Y5J8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Txlna-004ENSMUST00000154105791254 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ADZ3 A2ADZ4 A8Y5J8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Txlna-005ENSMUST00000132217781248 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ADZ3 A8Y5J8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Txlna-006ENSMUST0000013001768490 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8Y5J8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Txlna-002ENSMUST000001425774918No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays