Description

glycoprotein Ib, beta polypeptide [Source:MGI Symbol;Acc:MGI:107852]

Location
INSDC coordinates

chromosome:GRCm38:CM001009.2:18620319:18622403:1

About this gene

This gene has 2 transcripts (splice variants), 31 orthologues, 1 paralogue and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Gp1bb-202ENSMUST000001673881847206aaENSMUSP00000126292
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS49787P56400 NM_010327
NP_034457
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gp1bb-201ENSMUST00000051160645214aaENSMUSP00000059270
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28025B2RR03 NM_001001999
NP_001001999
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P3

PRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays