Description

neurotrophin 3 [Source:MGI Symbol;Acc:MGI:97380]

INSDC coordinates

chromosome:GRCm38:CM000999.2:126101413:126166744:1

About this gene

This gene has 2 transcripts (splice variants), 54 orthologues, 3 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ntf3-202ENSMUST000001122441427271aaENSMUSP00000107863
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51914Q3V1A4 NM_001164034
NM_001164035
NP_001157506
NP_001157507
TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ntf3-201ENSMUST000000504841316258aaENSMUSP00000052302
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS20553P20181 NM_008742
NP_032768
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P3

PRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays