Description

mucin 6, gastric [Source:MGI Symbol;Acc:MGI:2663233]

INSDC coordinates

chromosome:GRCm38:CM001000.2:141633456:141655319:1

About this gene

This gene has 3 transcripts (splice variants), 46 orthologues, 10 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Muc6-002ENSMUST0000019090787572918aaENSMUSP00000140483
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WR59 NM_181729
NP_859418
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Muc6-201ENSMUST0000006245186502853aaENSMUSP00000049941
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8WIM6 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Muc6-001ENSMUST0000018931450871437aaENSMUSP00000140388
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q0VAV1 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays