Gene: Lix1 ENSMUSG00000047786

Description

limb and CNS expressed 1 [Source:MGI Symbol;Acc:MGI:1913893]

Gene Synonyms

5730466L18Rik

Location

Chromosome 17: 17,622,934-17,679,649 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 2 transcripts (splice variants), 188 orthologues, 2 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000115576.3	Lix1-201	3116	282aa	ENSMUSP00000111239.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37456	A0A158RFU7 Q6P566	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000140134.2	Lix1-202	2678	155aa	ENSMUSP00000156223.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3TSN5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: Lix1 ENSMUSG00000047786

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Gene: Lix1 ENSMUSG00000047786

Summary

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