Gene: Cd109 ENSMUSG00000046186

Description

CD109 antigen [Source:MGI Symbol;Acc:MGI:2445221]

Gene Synonyms

9930012E15Rik, Gov platelet alloantigens

Location

Chromosome 9: 78,522,828-78,623,535 forward strand.

GRCm39:CM001002.3

About this gene

This gene has 2 transcripts (splice variants), 227 orthologues, 10 paralogues and is associated with 16 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000093812.5	Cd109-201	5860	1442aa	ENSMUSP00000091330.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23365	A6MDD3 Q8R422	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000163608.2	Cd109-202	1403	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: Cd109 ENSMUSG00000046186

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Gene: Cd109 ENSMUSG00000046186

Summary

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