Description

adrenergic receptor, alpha 1a [Source:MGI Symbol;Acc:MGI:104773]

Location
INSDC coordinates

chromosome:GRCm38:CM001007.2:66635251:66733462:1

Transcripts



This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Adra1a-004ENSMUST000001590684282466 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27223P97718 NP_001258689
NP_001258690
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Adra1a-002ENSMUST000000546614137466 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27223P97718 NM_013461
NP_001258689
NP_001258690
NP_038489
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Adra1a-001ENSMUST000001593654118427 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS70600Q8BUE5 NM_001271759
NP_001258688
NP_001258690
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Adra1a-003ENSMUST000001613392788466 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27223P97718 NP_001258689
NP_001258690
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Adra1a-005ENSMUST000001606473648No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays