Description

nucleoporin 62 [Source:MGI Symbol;Acc:MGI:1351500]

Location
INSDC coordinates

chromosome:GRCm38:CM001000.2:44816088:44830809:1

Transcripts



This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Nup62-001ENSMUST000000571952719526 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21216G3UZB1 Q5FWJ9 Q63850
NM_053074
NP_444304
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Nup62-002ENSMUST000001078912708526 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21216G3UZB1 Q5FWJ9 Q63850
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Nup62-003ENSMUST0000013686133442 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3UZB1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays