Description

collagen, type XVI, alpha 1 [Source:MGI Symbol;Acc:MGI:1095396]

Location

Chromosome 4: 130,047,840-130,099,283 forward strand.

GRCm38:CM000997.2

About this gene

This gene has 13 transcripts (splice variants), 56 orthologues, 11 paralogues and is a member of 3 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Col16a1-001ENSMUST0000004456552061580aaENSMUSP00000035802
 
Protein coding
CCDS38889Q8BLX7 NM_028266
NP_082542
TSL:1GENCODE basicAPPRIS P1
Col16a1-004ENSMUST0000014357740371283aaENSMUSP00000120339
 
Protein coding
-A3KFV7 -CDS 5' incompleteTSL:1
Col16a1-012ENSMUST00000123617452129aaENSMUSP00000121415
 
Protein coding
-A3KFV6 -CDS 3' incompleteTSL:5
Col16a1-005ENSMUST0000013225141022aaENSMUSP00000121209
 
Protein coding
-A3KFV1 -CDS 3' incompleteTSL:3
Col16a1-006ENSMUST0000014229338361aaENSMUSP00000119219
 
Protein coding
-A3KFV2 -CDS 3' incompleteTSL:2
Col16a1-002ENSMUST0000014343251381046aaENSMUSP00000120384
 
Nonsense mediated decay
-E9Q0X4 -TSL:1
Col16a1-003ENSMUST000000978674574No protein-
 
Processed transcript
---TSL:1
Col16a1-009ENSMUST000001060013519No protein-
 
Processed transcript
---TSL:1
Col16a1-013ENSMUST00000135675833No protein-
 
Processed transcript
---TSL:1
Col16a1-011ENSMUST00000146606717No protein-
 
Processed transcript
---TSL:5
Col16a1-008ENSMUST00000129937445No protein-
 
Processed transcript
---TSL:2
Col16a1-010ENSMUST00000151541322No protein-
 
Processed transcript
---TSL:3
Col16a1-007ENSMUST00000154441477No protein-
 
Retained intron
---TSL:5

Gene-based displays