Description

collagen, type XVI, alpha 1 [Source:MGI Symbol;Acc:MGI:1095396]

INSDC coordinates

chromosome:GRCm38:CM000997.2:130047840:130099283:1

Transcripts

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
Col16a1-001ENSMUST000000445655206ENSMUSP000000358021580Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS38889YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Col16a1-004ENSMUST000001435774037ENSMUSP000001203391283Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
Col16a1-012ENSMUST00000123617452ENSMUSP00000121415129Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
Col16a1-005ENSMUST00000132251410ENSMUSP0000012120922Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
Col16a1-006ENSMUST00000142293383ENSMUSP0000011921961Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
Col16a1-002ENSMUST000001434325138ENSMUSP000001203841046Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
Col16a1-003ENSMUST000000978674574No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Col16a1-009ENSMUST000001060013519No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
Col16a1-013ENSMUST00000135675833No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
Col16a1-011ENSMUST00000146606717No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
Col16a1-008ENSMUST00000129937445No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
Col16a1-010ENSMUST00000151541322No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
Col16a1-007ENSMUST00000154441477No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---

Gene-based displays