Description

collagen, type XVI, alpha 1 [Source:MGI Symbol;Acc:MGI:1095396]

INSDC coordinates

chromosome:GRCm38:CM000997.2:130047840:130099283:1

Transcripts

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Col16a1-001ENSMUST000000445655206 bp1580 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS38889A3KFV1 A3KFV2 Q8BLX7
NM_028266
NP_082542
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Col16a1-004ENSMUST000001435774037 bp1283 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3KFV7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Col16a1-012ENSMUST00000123617452 bp129 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3KFV6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Col16a1-005ENSMUST00000132251410 bp22 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3KFV1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Col16a1-006ENSMUST00000142293383 bp61 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3KFV1 A3KFV2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Col16a1-002ENSMUST000001434325138 bp1046 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-A3KFV1 A3KFV2 E9Q0X4
-
Col16a1-003ENSMUST000000978674574 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-009ENSMUST000001060013519 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-013ENSMUST00000135675833 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-011ENSMUST00000146606717 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-008ENSMUST00000129937445 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-010ENSMUST00000151541322 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-007ENSMUST00000154441477 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays