Description

sarcoglycan zeta [Source:MGI Symbol;Acc:MGI:2388820]

Location
INSDC coordinates

chromosome:GRCm38:CM001001.2:37522298:38661508:1

About this gene

This gene has 2 transcripts (splice variants), 71 orthologues, 2 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Sgcz-001ENSMUST000001188962389311aaENSMUSP00000113912
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS22251Q8BX51 NM_145841
NP_665840
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Sgcz-002ENSMUST000001357643027209aaENSMUSP00000117250
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RFA5 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays