Description

special AT-rich sequence binding protein 2 [Source:MGI Symbol;Acc:MGI:2679336]

Location
INSDC coordinates

chromosome:GRCm38:CM000994.2:56793981:56978650:1

Transcripts

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Satb2-001ENSMUST000001144155805733 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14965H3BKV4 Q546B3 Q8VI24
NM_139146
NP_631885
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Satb2-002ENSMUST000000428576277674 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BKV4 Q8VI24 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Satb2-003ENSMUST000001774244694615 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BKH3 H3BKV4 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Satb2-004ENSMUST0000017728245427 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BKV4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Satb2-005ENSMUST00000176759331104 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BJX4 H3BKV4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays