Description

protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:MGI Symbol;Acc:MGI:1924750]

INSDC coordinates

chromosome:GRCm38:CM001000.2:144476758:144553729:1

Transcripts

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Ppfia1-003ENSMUST000001681345181 bp1241 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52464B2RXW8 NM_001033319
NP_001028491
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ppfia1-002ENSMUST000001822264829 bp1266 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59738B2RXQ2 B8QI33 NM_001195086
NP_001182015
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ppfia1-004ENSMUST000001829583444 bp562 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Ppfia1-007ENSMUST00000182731696 bp94 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-S4R1I7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Ppfia1-010ENSMUST00000183063357 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Ppfia1-006ENSMUST000001831064088 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Ppfia1-005ENSMUST000001829822055 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Ppfia1-008ENSMUST00000183183928 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Ppfia1-009ENSMUST00000183197405 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---

Gene-based displays