Description

E74-like factor 2 [Source:MGI Symbol;Acc:MGI:1916507]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:51252720:51340663:1

About this gene

This gene has 13 transcripts (splice variants), 69 orthologues, 10 paralogues and is a member of 6 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Elf2-001ENSMUST000001946415919593aaENSMUSP00000141197
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17337Q9JHC9 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Elf2-010ENSMUST000000620093353581aaENSMUSP00000061076
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS71242Q3TVH6 Q9JHC9 NM_001291059
NP_001277988
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Elf2-201ENSMUST000001637482656593aaENSMUSP00000126871
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17337Q9JHC9 NM_023502
NP_075991
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Elf2-003ENSMUST000001080532611533aaENSMUSP00000103688
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS71241Q9JHC9 NM_001291063
NP_001277992
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Elf2-004ENSMUST000001080512514521aaENSMUSP00000103686
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS71240Q9JHC9 NM_001291062
NP_001277991
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Elf2-011ENSMUST000000911442366504aaENSMUSP00000088678
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0B4J1G5 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Elf2-008ENSMUST00000195432216159aaENSMUSP00000142300
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YY68 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Elf2-014ENSMUST0000015698337865aaENSMUSP00000141525
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YWF3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Elf2-006ENSMUST00000183463324987aaENSMUSP00000139360
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q80UM8 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Elf2-005ENSMUST00000183338108381aaENSMUSP00000139358
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-V9GXW8 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Elf2-007ENSMUST00000184677688113aaENSMUSP00000139199
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-V9GXK9 -TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Elf2-009ENSMUST00000194209549No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Elf2-012ENSMUST000001939091557No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays