Description

FXYD domain-containing ion transport regulator 1 [Source:MGI Symbol;Acc:MGI:1889273]

Location
INSDC coordinates

chromosome:GRCm38:CM001000.2:31051681:31055656:1

About this gene

This gene has 3 transcripts (splice variants), 35 orthologues, 1 paralogue and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Fxyd1-201ENSMUST0000003990962092aaENSMUSP00000048460
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21123Q9Z239 NM_019503
NM_052992
NP_062376
NP_443718
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Fxyd1-202ENSMUST0000007169760392aaENSMUSP00000071617
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21123Q9Z239 NM_194321
NP_919302
TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Fxyd1-203ENSMUST0000010811053992aaENSMUSP00000103745
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21123Q9Z239 NM_052991
NP_443717
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays