Description

ring finger protein 13 [Source:MGI Symbol;Acc:MGI:1346341]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:57736062:57835233:1

About this gene

This gene has 11 transcripts (splice variants), 68 orthologues, 11 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Rnf13-001ENSMUST000000418262678381aaENSMUSP00000049331
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50913O54965 NM_001113413
NP_001106884
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Rnf13-004ENSMUST000002004972573352aaENSMUSP00000142462
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8CB78 NM_001304454
NP_001291383
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rnf13-005ENSMUST000001982142027244aaENSMUSP00000143498
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8C4F9 NM_001304456
NP_001291385
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rnf13-002ENSMUST000001990411062268aaENSMUSP00000142335
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3UTG4 NM_011883
NP_036013
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rnf13-011ENSMUST00000198249486131aaENSMUSP00000142828
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Rnf13-010ENSMUST0000020060035264aaENSMUSP00000142594
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Rnf13-008ENSMUST0000019851034796aaENSMUSP00000142451
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Rnf13-006ENSMUST000001972053244166aaENSMUSP00000143692
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
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Rnf13-003ENSMUST000001989962848No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Rnf13-009ENSMUST00000197920435No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Rnf13-007ENSMUST000001977833873No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays