Description

nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 [Source:MGI Symbol;Acc:MGI:102469]

Location
INSDC coordinates

chromosome:GRCm38:CM001011.2:80606205:80713071:1

About this gene

This gene has 4 transcripts (splice variants), 69 orthologues, 4 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Nfatc1-204ENSMUST000001709054896939aaENSMUSP00000129001
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50336B5B2N2 Q6P7T9 NM_001164110
NP_001157582
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Nfatc1-202ENSMUST000000780494607827aaENSMUSP00000077196
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37873Q6P7T9 NM_198429
NP_940821
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Nfatc1-203ENSMUST000001679774604925aaENSMUSP00000126884
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50335B5B2N4 B5B2N7 NM_001164111
NM_001164112
NP_001157583
NP_001157584
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Nfatc1-201ENSMUST000000358004505703aaENSMUSP00000046312
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29369Q9DBQ6 NM_001164109
NM_016791
NP_001157581
NP_058071
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website

Gene-based displays