Description

eomesodermin homolog (Xenopus laevis) [Source:MGI Symbol;Acc:MGI:1201683]

INSDC coordinates

chromosome:GRCm38:CM001002.2:118478212:118486132:1

Transcripts

This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Eomes-001ENSMUST000000350203560707 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS23603F6VSW9 O54839 NM_010136
NP_034266
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Eomes-003ENSMUST000001117632869688 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52960F6VSW9 O54839 Q5PSA9
NM_001164789
NP_001158261
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Eomes-002ENSMUST000001506331647395 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6VSW9 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays