Description

eomesodermin homolog (Xenopus laevis) [Source:MGI Symbol;Acc:MGI:1201683]

INSDC coordinates

chromosome:GRCm38:CM001002.2:118478212:118486132:1

About this gene

This gene has 3 transcripts (splice variants), 75 orthologues, 3 paralogues, is a member of 1 Ensembl protein family and is associated with 10 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Eomes-001ENSMUST000000350203560707aaENSMUSP00000035020
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS23603O54839 NM_010136
NP_034266
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Eomes-003ENSMUST000001117632869688aaENSMUSP00000107393
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52960O54839 NM_001164789
NP_001158261
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Eomes-002ENSMUST000001506331647395aaENSMUSP00000118079
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6VSW9 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays