Description

coagulation factor X [Source:MGI Symbol;Acc:MGI:103107]

Location
INSDC coordinates

chromosome:GRCm38:CM001001.2:13037308:13056676:1

About this gene

This gene has 5 transcripts (splice variants), 63 orthologues, 14 paralogues, is a member of 1 Ensembl protein family and is associated with 4 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
F10-001ENSMUST000000638202503481aaENSMUSP00000068389
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS40226O88947 Q3TBR2 NM_007972
NP_031998
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

F10-002ENSMUST000000338211903493aaENSMUSP00000033821
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57606Q3U3V1 NM_001242368
NP_001229297
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
F10-005ENSMUST000001520341449319aaENSMUSP00000117312
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z521 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
F10-006ENSMUST000001284181395321aaENSMUSP00000121830
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z215 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
F10-004ENSMUST00000123768609119aaENSMUSP00000116984
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z7R3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays