Description

GATA binding protein 1 [Source:MGI Symbol;Acc:MGI:95661]

Location
INSDC coordinates

chromosome:GRCm38:CM001013.2:7959260:7978071:1

About this gene

This gene has 3 transcripts (splice variants), 60 orthologues, 5 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Gata1-001ENSMUST000000335021902413aaENSMUSP00000033502
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29981P17679 NM_008089
NP_032115
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gata1-002ENSMUST00000125418676109aaENSMUSP00000118052
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AUB3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gata1-003ENSMUST00000128449421124aaENSMUSP00000123620
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AUB4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays