Description

cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:88568]

Location

Chromosome 5: 136,248,135-136,567,490 reverse strand.

GRCm38:CM000998.2

About this gene

This gene has 14 transcripts (splice variants), 65 orthologues, 4 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Cux1-001ENSMUST00000004097128621426aaENSMUSP00000004097
 
Protein coding
CCDS39328E9QKE9 NM_009986
NP_034116
TSL:1GENCODE basicAPPRIS P3
Cux1-008ENSMUST00000175975109451504aaENSMUSP00000135223
 
Protein coding
CCDS71684H3BK24 NM_001291234
NP_001278163
TSL:1GENCODE basicAPPRIS ALT2
Cux1-006ENSMUST000001767452831676aaENSMUSP00000135512
 
Protein coding
CCDS57391H3BKT0 NM_001291239
NM_198602
NP_001278168
NP_941004
TSL:1GENCODE basic
Cux1-004ENSMUST000001762162821678aaENSMUSP00000135054
 
Protein coding
CCDS71685H3BJN3 NM_001291238
NM_001291240
NP_001278167
NP_001278169
TSL:1GENCODE basic
Cux1-005ENSMUST0000017677855201509aaENSMUSP00000135892
 
Protein coding
-H3BLS0 NM_001291233
NP_001278162
TSL:5GENCODE basicAPPRIS ALT2
Cux1-012ENSMUST0000017648648901389aaENSMUSP00000135370
 
Protein coding
-H3BKF6 -CDS 5' incompleteTSL:1
Cux1-011ENSMUST0000017617248821517aaENSMUSP00000135086
 
Protein coding
-H3BJQ9 -TSL:1GENCODE basicAPPRIS ALT2
Cux1-013ENSMUST000001759982195472aaENSMUSP00000135816
 
Protein coding
-H3BLJ7 -CDS 5' incompleteTSL:5
Cux1-017ENSMUST00000176423805268aaENSMUSP00000135036
 
Protein coding
-H3BJL7 -CDS 5' and 3' incompleteTSL:3
Cux1-003ENSMUST000001759182565199aaENSMUSP00000135606
 
Nonsense mediated decay
-H3BL09 -TSL:5
Cux1-009ENSMUST000001772971926543aaENSMUSP00000134819
 
Nonsense mediated decay
-H3BJ26 -TSL:5
Cux1-010ENSMUST000001639061885No protein-
 
Processed transcript
---TSL:1
Cux1-002ENSMUST000001773053290No protein-
 
Retained intron
---TSL:2
Cux1-007ENSMUST000001765011616No protein-
 
Retained intron
---TSL:2

Gene-based displays