Description

phospholipase A2, group IB, pancreas [Source:MGI Symbol;Acc:MGI:101842]

INSDC coordinates

chromosome:GRCm38:CM000998.2:115466262:115474722:1

About this gene

This gene has 4 transcripts (splice variants), 67 orthologues, 8 paralogues and is a member of 3 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Pla2g1b-001ENSMUST00000031495557146aaENSMUSP00000031495
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19592Q9Z0Y2 NM_011107
NP_035237
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Pla2g1b-003ENSMUST0000014578541977aaENSMUSP00000138683
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-S4R2K6 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pla2g1b-004ENSMUST00000125568387124aaENSMUSP00000120743
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YWH2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Pla2g1b-002ENSMUST0000011207136182aaENSMUSP00000107702
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z1N8 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays