Description

calcium/calmodulin-dependent protein kinase kinase 2, beta [Source:MGI Symbol;Acc:MGI:2444812]

INSDC coordinates

chromosome:GRCm38:CM000998.2:122731170:122779409:1

About this gene

This gene has 11 transcripts (splice variants), 67 orthologues, 2 paralogues and is a member of 3 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Camkk2-001ENSMUST000001116684861588aaENSMUSP00000107297
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8C078 NM_001199676
NP_001186605
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P5

PRINCIPAL5 - APPRIS candidate principal isoform (longest coding sequence).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Camkk2-006ENSMUST000001980294765420aaENSMUSP00000142896
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Camkk2-004ENSMUST000002001092751541aaENSMUSP00000143732
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_145358
NP_663333
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Camkk2-005ENSMUST000001967421084216aaENSMUSP00000142812
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3TV45 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Camkk2-007ENSMUST00000197373685145aaENSMUSP00000142717
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Camkk2-011ENSMUST0000019959944680aaENSMUSP00000143730
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Camkk2-010ENSMUST00000198257432120aaENSMUSP00000143162
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Camkk2-009ENSMUST0000019917956746aaENSMUSP00000142751
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Camkk2-008ENSMUST00000199988443No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Camkk2-003ENSMUST000001998303139No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Camkk2-002ENSMUST000001981772145No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays