Description

afamin [Source:MGI Symbol;Acc:MGI:2429409]

Location
INSDC coordinates

chromosome:GRCm38:CM000998.2:90518932:90553543:1

About this gene

This gene has 2 transcripts (splice variants), 44 orthologues, 4 paralogues, is a member of 1 Ensembl protein family and is associated with 3 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Afm-001ENSMUST000001131792038608aaENSMUSP00000108804
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39141O89020 NM_145146
NP_660128
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Afm-003ENSMUST000001287402465430aaENSMUSP00000117180
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O89020 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays