Description

tenascin C [Source:MGI Symbol;Acc:MGI:101922]

Location
INSDC coordinates

chromosome:GRCm38:CM000997.2:63959785:64047015:1

About this gene

This gene has 4 transcripts (splice variants), 74 orthologues, 11 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Tnc-201ENSMUST0000010737771002019aaENSMUSP00000103000
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18265Q80YX1 NM_011607
NP_035737
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Tnc-001ENSMUST0000003005668332019aaENSMUSP00000030056
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18265Q80YX1 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Tnc-002ENSMUST0000010737271062110aaENSMUSP00000102995
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q80YX1 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Tnc-003ENSMUST000001073712928832aaENSMUSP00000102994
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q80YX0 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays