Description

RAR-related orphan receptor gamma [Source:MGI Symbol;Acc:MGI:104856]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:94372794:94398276:1

About this gene

This gene has 4 transcripts (splice variants), 55 orthologues, 19 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeqFlags
Rorc-001ENSMUST000000297952136516aaENSMUSP00000029795
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17591NM_011281
NP_035411
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Rorc-002ENSMUST000001970402576495aaENSMUSP00000143763
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-NM_001293734
NP_001280663
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Rorc-003ENSMUST000002000091543347aaENSMUSP00000143610
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rorc-004ENSMUST000001987932592No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--

Gene-based displays