Description

phospholipase A2, group XIIA [Source:MGI Symbol;Acc:MGI:1913600]

INSDC coordinates

chromosome:GRCm38:CM000996.2:129878606:129895825:1

About this gene

This gene has 4 transcripts (splice variants), 60 orthologues, 1 paralogue and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Pla2g12a-001ENSMUST000000296291561192aaENSMUSP00000029629
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17836Q9EPR2 NM_001286948
NM_023196
NP_001273877
NP_075685
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Pla2g12a-002ENSMUST00000061165476153aaENSMUSP00000053651
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17837Q9EPR2 NM_183423
NP_904359
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pla2g12a-004ENSMUST00000196838625129aaENSMUSP00000143771
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Pla2g12a-003ENSMUST000001967362992No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays