Description

collagen, type XI, alpha 1 [Source:MGI Symbol;Acc:MGI:88446]

INSDC coordinates

chromosome:GRCm38:CM000996.2:114030540:114220718:1

Transcripts

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Col11a1-001ENSMUST000000921557667 bp1804 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17778Q3TTT4 Q3UST0 Q61245
Q8VIA4
NM_007729
NP_031755
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Col11a1-004ENSMUST000001236192064 bp568 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PVT8 Q8C4S5 Q8C6X0
Q8VIA3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Col11a1-003ENSMUST000001849782570 bp536 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-V9GWX8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Col11a1-002ENSMUST000001386802112 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays