Description

doublecortin-like kinase 1 [Source:MGI Symbol;Acc:MGI:1330861]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:55242364:55539068:1

About this gene

This gene has 15 transcripts (splice variants), 88 orthologues, 9 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Dclk1-201ENSMUST000000542377847756aaENSMUSP00000050034
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17359Q9JLM8 NM_019978
NP_064362
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Dclk1-202ENSMUST000000704187012422aaENSMUSP00000070292
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50910H7BX36 NM_001111052
NP_001104522
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Dclk1-002ENSMUST000001672046025363aaENSMUSP00000129334
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50909Q80VB6 NM_001111053
NP_001104523
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Dclk1-001ENSMUST000001967457962739aaENSMUSP00000143659
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_001195538
NP_001182467
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Dclk1-003ENSMUST00000199585519656aaENSMUSP00000142698
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8IP62 NM_001195540
NP_001182469
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Dclk1-005ENSMUST000001984374315449aaENSMUSP00000143016
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8CCN4 NM_001195539
NP_001182468
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Dclk1-004ENSMUST000001984124282432aaENSMUSP00000142637
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_001111051
NP_001104521
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Dclk1-006ENSMUST000001997022922421aaENSMUSP00000143507
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q1EDH1 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Dclk1-008ENSMUST000002003521662452aaENSMUSP00000142840
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Dclk1-007ENSMUST000001991691499382aaENSMUSP00000143563
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Dclk1-012ENSMUST00000200348413111aaENSMUSP00000143672
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Dclk1-009ENSMUST00000198821906No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Dclk1-013ENSMUST00000197870557No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Dclk1-010ENSMUST000001987571402No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Dclk1-011ENSMUST00000198154775No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays