Description

solute carrier protein family 52, member 3 [Source:MGI Symbol;Acc:MGI:1916948]

INSDC coordinates

chromosome:GRCm38:CM000995.2:151996511:152009258:1

About this gene

This gene has 4 transcripts (splice variants), 68 orthologues, 1 paralogue, is a member of 1 Ensembl protein family and is associated with 1 phenotype.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Slc52a3-001ENSMUST000000732282669460aaENSMUSP00000072961
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS16876Q9D6X5 NM_027172
NP_081448
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Slc52a3-002ENSMUST000001098612590460aaENSMUSP00000105487
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS16876Q9D6X5 NM_001164819
NP_001158291
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Slc52a3-201ENSMUST000001098592204250aaENSMUSP00000105485
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50749Q9D6X5 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Slc52a3-003ENSMUST000001098582094250aaENSMUSP00000105484
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50749Q9D6X5 NM_001164820
NP_001158292
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays