Description

CD82 antigen [Source:MGI Symbol;Acc:MGI:104651]

Location
INSDC coordinates

chromosome:GRCm38:CM000995.2:93419111:93463140:1

Transcripts



This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Cd82-002ENSMUST000000286441824266 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS16454A2AIJ1 A2AIJ2 A2AIJ4
P40237 Q3UII2
NM_001271432
NM_001271461
NM_001271462
NM_007656
NP_001258361
NP_001258390
NP_001258391
NP_031682
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Cd82-201ENSMUST000001164571683266 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS16454A2AIJ1 A2AIJ2 A2AIJ4
P40237 Q3UII2
NM_001136055
NP_001129527
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Cd82-001ENSMUST000000996961657266 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS16454A2AIJ1 A2AIJ2 A2AIJ4
P40237 Q3UII2
NM_001271430
NM_001271431
NP_001258359
NP_001258360
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Cd82-007ENSMUST000001112571003266 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS16454A2AIJ1 A2AIJ2 A2AIJ4
P40237 Q3UII2
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Cd82-005ENSMUST00000123565777179 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AIJ1 A2AIJ2 A2AIJ4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Cd82-008ENSMUST00000145553693146 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AIJ2 A2AIJ4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Cd82-006ENSMUST00000150508647146 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AIJ2 A2AIJ4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Cd82-003ENSMUST0000011125659288 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AIJ3 A2AIJ4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Cd82-004ENSMUST0000012480436621 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AIJ4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Cd82-009ENSMUST00000144168729No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Cd82-010ENSMUST00000126772463No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays