Description

LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]

INSDC coordinates

chromosome:GRCm38:CM000994.2:167689237:167848741:1

About this gene

This gene has 2 transcripts (splice variants), 63 orthologues, 11 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Lmx1a-001ENSMUST000000280033347382aaENSMUSP00000028003
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS15460Q543W2 Q9JKU8 NM_033652
NP_387501
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Lmx1a-002ENSMUST000001113773200382aaENSMUSP00000107008
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS15460Q543W2 Q9JKU8 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website

Gene-based displays